Whole Exome sequencing for the 1000 Genomes Project - SRA

SRX103764: Whole Exome sequencing for the 1000 Genomes Project
8 ILLUMINA (Illumina HiSeq 2000) runs: 24.1M spots, 3.8G bases, 2.6Gb downloads

Design: Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection

Submitted by: Broad Institute (BI)

Study: Exome sequencing of (KHV) Kinh in Ho Chi minh City, Vietnam HapMap population

Sample: Coriell HG02025

Library:

Name: Catch-88584

Instrument: Illumina HiSeq 2000

Strategy: WXS

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Spot descriptor:

1 forward barcode

Group tag	Basecalls
tagged_851	TCCAGCAA

85 reverse

BI GSSR sample ID: 120518.0 
BI GSSR sample LSID: broadinstitute.org:bsp.prod.sample:25MSH 
BI project name: C469 
BI work request ID: 26159 

Name	Step	Program	Version
base caller	2011-09-12 18:29:48.0	GAPipeline	RTA1.12.4.2

Runs: 8 runs, 24.1M spots, 3.8G bases, 2.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR359195	3,036,496	485.8M	328.1Mb	2011-10-29
SRR359198	2,893,495	463M	312.6Mb	2011-10-29
SRR360044	3,079,431	492.7M	333.4Mb	2011-10-31
SRR360051	3,061,970	489.9M	333.8Mb	2011-10-31
SRR360058	3,012,401	482M	325.2Mb	2011-10-31
SRR361123	3,020,507	483.3M	329.6Mb	2011-11-04
SRR363055	2,972,994	475.7M	324.4Mb	2011-11-06
SRR363077	2,983,079	477.3M	324.6Mb	2011-11-07

Supplemental Content

phospholemman isoform X1 [Equus asinus]
phospholemman isoform X1 [Equus asinus]
gi|2124491092|ref|XP_044615448.1|

Protein
Milieu Therapy
Milieu Therapy
A treatment program based on manipulation of the patient's environment by the medical staff. The patient does not participate in planning the treatment regimen....<br/>Year introduced: 1969(1967)

MeSH
Crisis Intervention
Crisis Intervention
Brief therapeutic approach which is ameliorative rather than curative of acute psychiatric emergencies. Used in contexts such as emergency rooms of psychiatric or general hosp...<br/>Year introduced: 1970

MeSH
Eye Manifestations
Eye Manifestations
Ocular disorders attendant upon non-ocular disease or injury.<br/>

MeSH

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SRA